---
description: Our free tool can help you get a quick and detailed side-by-side comparison for Clover vs PayJunction. Learn more about each of these software and make the best decision for your business.
image: https://gdm-localsites-assets-gfprod.imgix.net/images/getapp/og_logo-94fd2a03a6c7a0e54fc0c9e21a1c0ce9.png
title: Clover vs PayJunction Comparison | GetApp New Zealand 2026
---

Breadcrumb: [Home](/) > [Liquor Store POS Software](/directory/3447/liquor-store-pos/software) > [Clover \<span\>vs\</span\> PayJunction](https://www.getapp.co.nz/compare/101591/112961/clover/vs/payjunction)

# Compare Clover vs PayJunction

Canonical: https://www.getapp.co.nz/compare/101591/112961/clover/vs/payjunction

> Detailed comparison between Clover and PayJunction. Check ratings, reviews, pricing, and features to make the best decision for your business.

-----

## At a Glance

| Metric | Clover | PayJunction |
| **Overall rating** | 3.8/5 | 4.8/5 |
| **Total Reviews** | 570 | 112 |
| **Starting Price** | - | US$50.00 |
| **Free Trial** | Yes | - |
| **Free Version** | No | No |
| **Deployment** | Cloud, SaaS, Web-based, Mac (Desktop), Windows (Desktop), Windows (On-Premise), Linux (On-Premise), Android (Mobile), iPhone (Mobile), iPad (Mobile) | Cloud, SaaS, Web-based, iPhone (Mobile), iPad (Mobile) |
| **Support** | Email/Help Desk, FAQs/Forum, Knowledge Base, Phone Support, 24/7 (Live rep), Chat | Email/Help Desk, Knowledge Base, Phone Support, Chat |
| **Training** | Live Online, Webinars, Documentation, Videos | In Person, Live Online, Webinars, Documentation, Videos |

## Key features

### Clover

- ACH Payment Processing
- API
- Credit Card Processing
- Customer Accounts
- Customisable Reports
- Electronic Payments
- Electronic Signature
- Multi-Location
- Payment Processing
- Point of Sale (POS)
- Pricing Management
- Product Catalog
- Receipt Management
- Reporting/Analytics
- Sales Reports
- Scheduling
- Third-Party Integrations
- Transaction History
- Transaction Monitoring

### PayJunction

- ACH Payment Processing
- API
- Credit Card Processing
- Customer Accounts
- Customisable Reports
- Electronic Payments
- Electronic Signature
- Multi-Location
- Payment Links
- Payment Processing
- Point of Sale (POS)
- Receipt Management
- Reporting/Analytics
- Sales Reports
- Third-Party Integrations
- Transaction History
- Transaction Monitoring

## Links

- [View Clover Profile](https://www.getapp.co.nz/software/101591/clover)
- [View PayJunction Profile](https://www.getapp.co.nz/software/112961/payjunction)
- [View Original Comparison](https://www.getapp.co.nz/compare/101591/112961/clover/vs/payjunction)

-----

## Structured Data

<script type="application/ld+json">
  {"@context":"https://schema.org","@graph":[{"name":"Clover vs PayJunction Comparison | GetApp New Zealand 2026","description":"Our free tool can help you get a quick and detailed side-by-side comparison for Clover vs PayJunction. Learn more about each of these software and make the best decision for your business.","url":"https://www.getapp.co.nz/compare/101591/112961/clover/vs/payjunction","about":[{"@id":"https://www.getapp.co.nz/software/101591/clover#software"},{"@id":"https://www.getapp.co.nz/software/112961/payjunction#software"}],"breadcrumb":{"@id":"https://www.getapp.co.nz/compare/101591/112961/clover/vs/payjunction#breadcrumblist"},"@type":["WebPage","CollectionPage"],"@id":"https://www.getapp.co.nz/compare/101591/112961/clover/vs/payjunction#webpage","publisher":{"@id":"https://www.getapp.co.nz/#organization"},"inLanguage":"en-NZ","isPartOf":{"@id":"https://www.getapp.co.nz/#website"}},{"name":"Clover","description":"Clover is designed to help small businesses manage their entire business by providing a powerful point of sales software, accessible from smartphones. Users get activity reports &amp; insights and manage the shop in real time: edit menus, overseeinventory and keep an eye on the employees.\n\nClover also provides payment facilities for POS: credit &amp; debit card payments are accepted &amp; customers' data are securely stored. Clover also accepts Apple Pay technologies to make processes smoother.","image":"https://gdm-catalog-fmapi-prod.imgix.net/ProductScreenshot/996558eb-8acc-43dd-9619-75fb51d90499.png","url":"https://www.getapp.co.nz/software/101591/clover","@type":"SoftwareApplication","@id":"https://www.getapp.co.nz/software/101591/clover#software","applicationCategory":"BusinessApplication","publisher":{"@id":"https://www.getapp.co.nz/#organization"},"aggregateRating":{"@type":"AggregateRating","bestRating":5,"ratingCount":570,"ratingValue":3.8},"operatingSystem":"Cloud, Apple, Windows, Windows on premise, Linux on premise, Android, Platform ios, Platform ipad"},{"name":"PayJunction","description":"PayJunction is a payment gateway and merchant service which provides mid to large scale enterprises with the tools to process any type of payment in store or online. Features such as smart payment processing, paperless receipts, electronic signature capture, account management, and more allow businesses to accept payments from a variety of sources including swipe cards, chip cards, e-checks, phones, Apple pay, and more. \n\nBusinesses and their customers can benefit from a fully digital payment processing experience with PayJunction’s electronic signature capture and digital receipt features. Using the integrated PayJunction payment terminal hardware, users can collect paperless signatures either in-store at the point of sale, or remotely for card-not-present transactions, and signatures are saved to the PayJunction software for secure storage and to enhance anti-fraud measures. Digital receipts can be generated automatically based on data from the POS terminal and sent to customers via email to eliminate the need for paper receipts.\n\nAll transactions are stored within the PayJunction platform so that users have access to every client’s transaction history, and the search functionality facilitates the discovery of archived customer data. The back-end system also allows users to manage their smart terminal, process checks, key credit cards, recharge customer accounts, and manage batches, and reports can be viewed to gain insight into business performance and sales statistics.","image":"https://gdm-catalog-fmapi-prod.imgix.net/ProductScreenshot/bd1d9e2c-cebc-4fad-9a1a-9eb4cb2b0661.png","url":"https://www.getapp.co.nz/software/112961/payjunction","@type":"SoftwareApplication","@id":"https://www.getapp.co.nz/software/112961/payjunction#software","applicationCategory":"BusinessApplication","publisher":{"@id":"https://www.getapp.co.nz/#organization"},"aggregateRating":{"@type":"AggregateRating","bestRating":5,"ratingCount":112,"ratingValue":4.8},"offers":{"price":"50","@type":"Offer","priceCurrency":"USD"},"operatingSystem":"Cloud, Platform ios, Platform ipad"},{"@type":"BreadcrumbList","itemListElement":[{"name":"Home","position":1,"item":"/","@type":"ListItem"},{"name":"Liquor Store POS Software","position":2,"item":"/directory/3447/liquor-store-pos/software","@type":"ListItem"},{"name":"Clover vs PayJunction","position":3,"item":"https://www.getapp.co.nz/compare/101591/112961/clover/vs/payjunction","@type":"ListItem"}],"@id":"https://www.getapp.co.nz/compare/101591/112961/clover/vs/payjunction#breadcrumblist"}]}
</script>
